sem stata function gsem Search Results


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Broad Institute Inc gsea 4.1.0
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Broad Institute Inc gene set enrichment analysis version 4.1.0
Immune landscape background. Bar plots showing nominal enrichment score for <t>GSEA</t> pathways significantly correlated to COVID-19 status for ( A ) BALF, ( B ) lung biopsy, and ( C ) PBMC samples. Stacked bar plots showing relative immune cell abundances for ( D ) BALF, lung biopsy, and ( E ) PBMC samples.
Gene Set Enrichment Analysis Version 4.1.0, supplied by Broad Institute Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Tribest Corporation twin screw extruder
Immune landscape background. Bar plots showing nominal enrichment score for <t>GSEA</t> pathways significantly correlated to COVID-19 status for ( A ) BALF, ( B ) lung biopsy, and ( C ) PBMC samples. Stacked bar plots showing relative immune cell abundances for ( D ) BALF, lung biopsy, and ( E ) PBMC samples.
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New England Biolabs neo gseb
Immune landscape background. Bar plots showing nominal enrichment score for <t>GSEA</t> pathways significantly correlated to COVID-19 status for ( A ) BALF, ( B ) lung biopsy, and ( C ) PBMC samples. Stacked bar plots showing relative immune cell abundances for ( D ) BALF, lung biopsy, and ( E ) PBMC samples.
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National Institute of Standards and Technology isotopes
Immune landscape background. Bar plots showing nominal enrichment score for <t>GSEA</t> pathways significantly correlated to COVID-19 status for ( A ) BALF, ( B ) lung biopsy, and ( C ) PBMC samples. Stacked bar plots showing relative immune cell abundances for ( D ) BALF, lung biopsy, and ( E ) PBMC samples.
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Image Search Results


Immune landscape background. Bar plots showing nominal enrichment score for GSEA pathways significantly correlated to COVID-19 status for ( A ) BALF, ( B ) lung biopsy, and ( C ) PBMC samples. Stacked bar plots showing relative immune cell abundances for ( D ) BALF, lung biopsy, and ( E ) PBMC samples.

Journal: Cells

Article Title: Identification of Lung and Blood Microbiota Implicated in COVID-19 Prognosis

doi: 10.3390/cells10061452

Figure Lengend Snippet: Immune landscape background. Bar plots showing nominal enrichment score for GSEA pathways significantly correlated to COVID-19 status for ( A ) BALF, ( B ) lung biopsy, and ( C ) PBMC samples. Stacked bar plots showing relative immune cell abundances for ( D ) BALF, lung biopsy, and ( E ) PBMC samples.

Article Snippet: We used Gene Set Enrichment Analysis (GSEA) version 4.1.0 (UCSD and Broad Institute, San Diego and Cambridge, United States) to find gene enrichment related to microbe abundance and covid status.

Techniques:

Select gene networks. Gene networks of GSEA pathways each correlated to three microbes with boxplots of microbe abundance vs. IA gene expression for microbes significantly correlated to IA gene expression for genes found to be enriched within the respective gene network. The gene networks were produced using the Cytoscape Reactome FI software. All boxplots were produced using the Kruskal-Wallis test. The networks are for the immunological signatures ( A ) GSE17974_CTRL_VS_ACT_IL4_AND_ANTI_IL12_72H_CD4_TCELL_DN, ( B ) GSE4590_SMALL_VS_LARGE_PRE_BCELL_UP, and ( C ) GSE3565_DUSP1_VS_WT_SPLENOCYTES_UP.

Journal: Cells

Article Title: Identification of Lung and Blood Microbiota Implicated in COVID-19 Prognosis

doi: 10.3390/cells10061452

Figure Lengend Snippet: Select gene networks. Gene networks of GSEA pathways each correlated to three microbes with boxplots of microbe abundance vs. IA gene expression for microbes significantly correlated to IA gene expression for genes found to be enriched within the respective gene network. The gene networks were produced using the Cytoscape Reactome FI software. All boxplots were produced using the Kruskal-Wallis test. The networks are for the immunological signatures ( A ) GSE17974_CTRL_VS_ACT_IL4_AND_ANTI_IL12_72H_CD4_TCELL_DN, ( B ) GSE4590_SMALL_VS_LARGE_PRE_BCELL_UP, and ( C ) GSE3565_DUSP1_VS_WT_SPLENOCYTES_UP.

Article Snippet: We used Gene Set Enrichment Analysis (GSEA) version 4.1.0 (UCSD and Broad Institute, San Diego and Cambridge, United States) to find gene enrichment related to microbe abundance and covid status.

Techniques: Gene Expression, Produced, Software

Microbe correlation to GSEA pathways and immune cells. Volcano plots of ( A ) microbe abundance correlated to GSEA pathways with the most significant pathways indicated and of ( B ) microbe abundance correlated to immune cell abundances with the most significant microbe immune cell pairs indicated. Labeled data points correspond to those with cyan outlines.

Journal: Cells

Article Title: Identification of Lung and Blood Microbiota Implicated in COVID-19 Prognosis

doi: 10.3390/cells10061452

Figure Lengend Snippet: Microbe correlation to GSEA pathways and immune cells. Volcano plots of ( A ) microbe abundance correlated to GSEA pathways with the most significant pathways indicated and of ( B ) microbe abundance correlated to immune cell abundances with the most significant microbe immune cell pairs indicated. Labeled data points correspond to those with cyan outlines.

Article Snippet: We used Gene Set Enrichment Analysis (GSEA) version 4.1.0 (UCSD and Broad Institute, San Diego and Cambridge, United States) to find gene enrichment related to microbe abundance and covid status.

Techniques: Labeling